POU6F2 - POU domain, class 6, transcription factor 2 - human protein (Sequence)
 
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POU6F2 »  POU domain, class 6, transcription factor 2
 
Protein also known as:  Retina-derived POU domain factor 1 (RPF-1).
Gene name:  POU6F2
Entry whose protein(s) existence is based on evidence at protein level
extend overview
1 18 2
GENE REF ISO

Displayed isoform: Iso 1     

 
 
Isoform Iso 1   691 aaMass: 73265 Da,  pI: 7.31
MSALLQDPMI AGQVSKPLLS VRSEMNAELR GEDKAATSDS ELNEPLLAPV ESNDSEDTPS KLFGARGNPA LSDPGTPDQH QASQTHPPFP VGPQPLLTAQ QLASAVAGVM PGGPPALNQP ILIPFNMAGQ LGGQQGLVLT LPTANLTNIQ GLVAAAAAGG IMTLPLQNLQ ATSSLNSQLQ QLQLQLQQQQ QQQQQQPPPS TNQHPQPAPQ APSQSQQQPL QPTPPQQPPP ASQQPPAPTS QLQQAPQPQQ HQPHSHSQNQ NQPSPTQQSS SPPQKPSQSP GHGLPSPLTP PNPLQLVNNP LASQAAAAAA AMSSIASSQA FGNALSSLQG VTGQLVTNAQ GQIIGTIPLM PNPGPSSQAA SGTQGLQVQP ITPQLLTNAQ GQIIATVIGN QILPVINTQG ITLSPIKPGQ QLHQPSQTSV GQAASQGNLL HLAHSQASMS QSPVRQASSS SSSSSSSSAL SVGQLVSNPQ TAAGEVDGVN LEEIREFAKA FKIRRLSLGL TQTQVGQALS ATEGPAYSQS AICRHTILRS HFFLPQEAQE NTIASSLTAK LNPGLLYPAR FEKLDITPKS AQKIKPVLER WMAEAEARHR AGMQNLTEFI GSEPSKKRKR RTSFTPQALE ILNAHFEKNT HPSGQEMTEI AEKLNYDREV VRVWFCNKRQ ALKNTIKRLK QHEPATAVPL EPLTDSLEEN S

Sequence

 show evidences
Sequence caution 
The sequence AAB49727 differs from that shown. Reason: erroneous gene model prediction.  
  • CuratedUniProtKB
The sequence AAB49728 differs from that shown. Reason: erroneous initiation.Translation N-terminally extended.  
  • CuratedUniProtKB
The sequence AAS07475 differs from that shown. Reason: erroneous initiation.Translation N-terminally extended.  
  • CuratedUniProtKB
The sequence EAL23992 differs from that shown. Reason: erroneous gene model prediction.  
  • CuratedUniProtKB
 

Keywords

Coding sequence diversity 
Alternative splicing  definition   [KW-0025]
Domain 
Homeobox  definition   [KW-0371]
Technical term 
Reference proteome  definition   [KW-1185]
 

Further external links

Family and domain databases
Gene3D: 1.10.10.60
Gene3D: 1.10.260.40
InterPro: IPR000327 [ POU specific ]
InterPro: IPR001356 [ Homeobox dom ]
InterPro: IPR009057 [ Homeodomain-like ]
InterPro: IPR010982 [ Lambda DNA-bd dom ]
InterPro: IPR015585 [ POU dom 5/6 ]
InterPro: IPR013847 [ POU ]
PANTHER: PTHR11636:SF15 [ PTHR11636:SF15 ]
Pfam: PF00046 [ Homeobox ]
Pfam: PF00157 [ Pou ]
PRINTS: PR00028 [ POUDOMAIN ]
PROSITE: PS00465 [ POU 2 ]
PROSITE: PS51179 [ POU 3 ]
PROSITE: PS00035 [ POU 1 ]
PROSITE: PS50071 [ HOMEOBOX 2 ]
SMART: SM00352 [ POU ]
SMART: SM00389 [ HOX ]
SUPFAM: SSF47413 [ SSF47413 ]
SUPFAM: SSF46689 [ SSF46689 ]
Genome annotation databases
Ensembl: Transcript: ENST00000416452;  Protein: ENSP00000404868;  Gene: ENSG00000106536.
Ensembl: Transcript: ENST00000403058;  Protein: ENSP00000384004;  Gene: ENSG00000106536.
Ensembl: Transcript: ENST00000451021;  Protein: ENSP00000409684;  Gene: ENSG00000106536.
Ensembl: Transcript: ENST00000518318;  Protein: ENSP00000430514;  Gene: ENSG00000106536.
Ensembl: Transcript: ENST00000524147;  Protein: ENSP00000452911;  Gene: ENSG00000106536.
Ensembl: Transcript: ENST00000520104;  Protein: ENSP00000453020;  Gene: ENSG00000106536.
Ensembl: Transcript: ENST00000559001;  Protein: ENSP00000452633;  Gene: ENSG00000106536.
Ensembl: Transcript: ENST00000464276;  Protein: ENSP00000475747;  Gene: ENSG00000106536.
KEGG: hsa:11281
UCSC: uc003thb.2
Organism-specific databases
MGI: MGI:2443631 [ Pou6f2 ]
Other
ChiTaRS: POU6F2
PTM databases
PhosphoSite: P78424
Phylogenomic databases
eggNOG: NOG241882
HOVERGEN: HBG008230
InParanoid: P78424
KO: K09368
OMA: LKQHEPT
OrthoDB: EOG7353Z3
Sequence databases
CCDS: CCDS34620.2 [ P78424-1 ]
CCDS: CCDS55103.1 [ P78424-2 ]
EMBL: Genomic DNA:  AC092174 . Translation:  AAP21873.1 .
EMBL: Genomic DNA:  U91934 . Translation:  AAB49727.1 . Sequence problems.
EMBL: Genomic DNA:  AC073345 . Translation:  AAS07475.1 . Different initiation.
EMBL: mRNA:  U91935 . Translation:  AAB49728.1 . Different initiation.
EMBL: Genomic DNA:  AC011292 . No translation available.
EMBL: Genomic DNA:  AC005483 . Translation:  AAC83404.2 .
EMBL: Genomic DNA:  CH236951 . Translation:  EAL23992.1 . Sequence problems.
IPI: IPI00220088
IPI: IPI00926929
RefSeq: Protein:  NP_001159490.1. Nucleotide sequence:  NM_001166018.1.
RefSeq: Protein:  NP_009183.3. Nucleotide sequence:  NM_007252.3.
UniProtKB: P78424
Protocols and materials databases
DNASU: 11281